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vector pj98  (Addgene inc)


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    Structured Review

    Addgene inc vector pj98
    Vector Pj98, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 20 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/cmv+brainbow+2+1+r/CMV-Brainbow-2%2E1+R+(Plasmid+%2318723)/pmc12509891-376-14-16
    Average 93 stars, based on 20 article reviews
    vector pj98 - by Bioz Stars, 2026-09
    93/100 stars

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    Related Articles

    Polymerase Chain Reaction:

    Article Title: Digital switching in a biosensor circuit via programmable timing of gene availability
    Article Snippet: .. Cerulean was PCR amplified with PR13 and PR14 from CMV-Brainbow-2.1 R (Addgene plasmid no. 18723) and inserted in EF1α–eGFP (Addgene plasmid no. 11154) using EcoRI and EagI. ..

    Article Title: Generation of a human embryonic stem cell line (SMUDHe010-A-1A) carrying Brainbow cassette in the AAVS1 gene by CRISPR/Cas9-mediated homologous recombination.
    Article Snippet: Firstly, the double strands of sgAAVS1 were annealed, introduced into lenti CRISPRv2 vector, which had been digested with BsmBI (NEB, USA, R0739L) before, using the T4 DNA Ligase (NEB, USA, M0202S), to get a plasmid named lenti-sgAAVS1. .. To construct the donor plasmid AAVS1-arm1-Brainbow-arm2, we firstly cloned two AAVS1 locus homology arms by PCR amplifying from the H9 cell DNA, and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were amplified by PCR from CMV-Brainbow-2.1 R (Addgene, Cambridge, MA, www.addgene.org/). .. The homology Arm1 and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were connected by overlap extension PCR with primers containing restriction sites for PciI(NEB, USA, R0655L) and NheI(NEB, USA, R3131L).

    Article Title: Digital switching in a biosensor circuit via programmable timing of gene availability
    Article Snippet: .. Cerulean was PCR amplified with PR13 and PR14 from CMV-Brainbow-2.1 R (Addgene plasmid #18723) and inserted in EF1α–eGFP (Addgene plasmid #11154) using EcoRI and EagI. ..

    Amplification:

    Article Title: Digital switching in a biosensor circuit via programmable timing of gene availability
    Article Snippet: .. Cerulean was PCR amplified with PR13 and PR14 from CMV-Brainbow-2.1 R (Addgene plasmid no. 18723) and inserted in EF1α–eGFP (Addgene plasmid no. 11154) using EcoRI and EagI. ..

    Article Title: Generation of a human embryonic stem cell line (SMUDHe010-A-1A) carrying Brainbow cassette in the AAVS1 gene by CRISPR/Cas9-mediated homologous recombination.
    Article Snippet: Firstly, the double strands of sgAAVS1 were annealed, introduced into lenti CRISPRv2 vector, which had been digested with BsmBI (NEB, USA, R0739L) before, using the T4 DNA Ligase (NEB, USA, M0202S), to get a plasmid named lenti-sgAAVS1. .. To construct the donor plasmid AAVS1-arm1-Brainbow-arm2, we firstly cloned two AAVS1 locus homology arms by PCR amplifying from the H9 cell DNA, and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were amplified by PCR from CMV-Brainbow-2.1 R (Addgene, Cambridge, MA, www.addgene.org/). .. The homology Arm1 and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were connected by overlap extension PCR with primers containing restriction sites for PciI(NEB, USA, R0655L) and NheI(NEB, USA, R3131L).

    Article Title: Digital switching in a biosensor circuit via programmable timing of gene availability
    Article Snippet: .. Cerulean was PCR amplified with PR13 and PR14 from CMV-Brainbow-2.1 R (Addgene plasmid #18723) and inserted in EF1α–eGFP (Addgene plasmid #11154) using EcoRI and EagI. ..

    Plasmid Preparation:

    Article Title: Digital switching in a biosensor circuit via programmable timing of gene availability
    Article Snippet: .. Cerulean was PCR amplified with PR13 and PR14 from CMV-Brainbow-2.1 R (Addgene plasmid no. 18723) and inserted in EF1α–eGFP (Addgene plasmid no. 11154) using EcoRI and EagI. ..

    Article Title: Diversity and wiring variability of visual local neurons in the Drosophila medulla M6 stratum
    Article Snippet: .. CMV-Brainbow-2.1 R (Livet et al., ) was purchased from Addgene (Cambridge, MA; plasmid 18723) and contains four cassettes of fluorescent protein (hrGFPII-NLS, eYFP, tdimer2, and M-mCerulean), each containing a loxp site linked to a fluorescent protein-coding region and a terminator. .. The CMV-Brainbow-2.1 R clone contains NheI and XhoI cutting sites for the release of the full four cassettes; hence, this region was cloned into the XhoI and XbaI sites of the pP[UAST-AI] vector (Kuo et al., ) to create the pP[UAST-Brainbow2.1R-2] transgene. pAD-CRE-HA was also purchased from Addgene (plasmid 16583) and contains XhaI and NheI cutting sites for the release of CRE-HA; hence, the CRE-HA gene was cloned into the XbaI site of the pCaspeR-hs vector (DGRC 1215) to create the pCaspeR-hs-CRE-HA transgene.

    Article Title: Generation of a human embryonic stem cell line (SMUDHe010-A-1A) carrying Brainbow cassette in the AAVS1 gene by CRISPR/Cas9-mediated homologous recombination.
    Article Snippet: Firstly, the double strands of sgAAVS1 were annealed, introduced into lenti CRISPRv2 vector, which had been digested with BsmBI (NEB, USA, R0739L) before, using the T4 DNA Ligase (NEB, USA, M0202S), to get a plasmid named lenti-sgAAVS1. .. To construct the donor plasmid AAVS1-arm1-Brainbow-arm2, we firstly cloned two AAVS1 locus homology arms by PCR amplifying from the H9 cell DNA, and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were amplified by PCR from CMV-Brainbow-2.1 R (Addgene, Cambridge, MA, www.addgene.org/). .. The homology Arm1 and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were connected by overlap extension PCR with primers containing restriction sites for PciI(NEB, USA, R0655L) and NheI(NEB, USA, R3131L).

    Article Title: Diversity and wiring variability of visual local neurons in the Drosophila medulla M6 stratum
    Article Snippet: CMV-Brainbow-2.1 R (Livet et al., ) was purchased from Addgene (Cambridge, MA; plasmid 18723) and contains four cassettes of fluorescent protein (hrGFPII-NLS, eYFP, tdimer2, and M-mCerulean), each containing a loxp site linked to a fluorescent protein-coding region and a terminator. .. The CMV-Brainbow-2.1 R clone contains NheI and XhoI cutting sites for the release of the full four cassettes; hence, this region was cloned into the XhoI and XbaI sites of the pP[UAST-AI] vector (Kuo et al., ) to create the pP[UAST-Brainbow2.1R-2] transgene. pAD-CRE-HA was also purchased from Addgene (plasmid 16583) and contains XhaI and NheI cutting sites for the release of CRE-HA; hence, the CRE-HA gene was cloned into the XbaI site of the pCaspeR-hs vector (DGRC 1215) to create the pCaspeR-hs-CRE-HA transgene. ..

    Article Title: Development of an in vivo model to study clonal lineage relationships in hematopoietic cells using Brainbow2.1/Confetti mice
    Article Snippet: .. The four Brainbow2.1 XFPs were cloned from CMV-Brainbow-2.1 R (CMV-Brainbow-2.1 R was a gift from Joshua Sanes (Addgene plasmid # 18723; http://n2t.net/addgene:18723 ; RRID:Addgene_18723) [ ] into CMV-Neomycine expressing plasmids. .. Female Rag1 -/- mice were kept under specific-pathogen free conditions and treated 1 week before transplantation with triple antibiotic autoclaved acidified drinking water (560 μg/l polymyxin B (Bupha, Uitgeest Netherlands), 700 μg/l ciprofloxacin (Bayer, Mijdrecht, the Netherlands) and 800 μg/l amphotheracin B (Bristol-Myers Squibb, Woerden, the Netherlands).

    Article Title: Digital switching in a biosensor circuit via programmable timing of gene availability
    Article Snippet: .. Cerulean was PCR amplified with PR13 and PR14 from CMV-Brainbow-2.1 R (Addgene plasmid #18723) and inserted in EF1α–eGFP (Addgene plasmid #11154) using EcoRI and EagI. ..

    Construct:

    Article Title: Generation of a human embryonic stem cell line (SMUDHe010-A-1A) carrying Brainbow cassette in the AAVS1 gene by CRISPR/Cas9-mediated homologous recombination.
    Article Snippet: Firstly, the double strands of sgAAVS1 were annealed, introduced into lenti CRISPRv2 vector, which had been digested with BsmBI (NEB, USA, R0739L) before, using the T4 DNA Ligase (NEB, USA, M0202S), to get a plasmid named lenti-sgAAVS1. .. To construct the donor plasmid AAVS1-arm1-Brainbow-arm2, we firstly cloned two AAVS1 locus homology arms by PCR amplifying from the H9 cell DNA, and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were amplified by PCR from CMV-Brainbow-2.1 R (Addgene, Cambridge, MA, www.addgene.org/). .. The homology Arm1 and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were connected by overlap extension PCR with primers containing restriction sites for PciI(NEB, USA, R0655L) and NheI(NEB, USA, R3131L).

    Clone Assay:

    Article Title: Generation of a human embryonic stem cell line (SMUDHe010-A-1A) carrying Brainbow cassette in the AAVS1 gene by CRISPR/Cas9-mediated homologous recombination.
    Article Snippet: Firstly, the double strands of sgAAVS1 were annealed, introduced into lenti CRISPRv2 vector, which had been digested with BsmBI (NEB, USA, R0739L) before, using the T4 DNA Ligase (NEB, USA, M0202S), to get a plasmid named lenti-sgAAVS1. .. To construct the donor plasmid AAVS1-arm1-Brainbow-arm2, we firstly cloned two AAVS1 locus homology arms by PCR amplifying from the H9 cell DNA, and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were amplified by PCR from CMV-Brainbow-2.1 R (Addgene, Cambridge, MA, www.addgene.org/). .. The homology Arm1 and CMV enhancer, chicken β-actin promoter, chimeric intron fragments were connected by overlap extension PCR with primers containing restriction sites for PciI(NEB, USA, R0655L) and NheI(NEB, USA, R3131L).

    Article Title: Diversity and wiring variability of visual local neurons in the Drosophila medulla M6 stratum
    Article Snippet: CMV-Brainbow-2.1 R (Livet et al., ) was purchased from Addgene (Cambridge, MA; plasmid 18723) and contains four cassettes of fluorescent protein (hrGFPII-NLS, eYFP, tdimer2, and M-mCerulean), each containing a loxp site linked to a fluorescent protein-coding region and a terminator. .. The CMV-Brainbow-2.1 R clone contains NheI and XhoI cutting sites for the release of the full four cassettes; hence, this region was cloned into the XhoI and XbaI sites of the pP[UAST-AI] vector (Kuo et al., ) to create the pP[UAST-Brainbow2.1R-2] transgene. pAD-CRE-HA was also purchased from Addgene (plasmid 16583) and contains XhaI and NheI cutting sites for the release of CRE-HA; hence, the CRE-HA gene was cloned into the XbaI site of the pCaspeR-hs vector (DGRC 1215) to create the pCaspeR-hs-CRE-HA transgene. ..

    Article Title: Development of an in vivo model to study clonal lineage relationships in hematopoietic cells using Brainbow2.1/Confetti mice
    Article Snippet: .. The four Brainbow2.1 XFPs were cloned from CMV-Brainbow-2.1 R (CMV-Brainbow-2.1 R was a gift from Joshua Sanes (Addgene plasmid # 18723; http://n2t.net/addgene:18723 ; RRID:Addgene_18723) [ ] into CMV-Neomycine expressing plasmids. .. Female Rag1 -/- mice were kept under specific-pathogen free conditions and treated 1 week before transplantation with triple antibiotic autoclaved acidified drinking water (560 μg/l polymyxin B (Bupha, Uitgeest Netherlands), 700 μg/l ciprofloxacin (Bayer, Mijdrecht, the Netherlands) and 800 μg/l amphotheracin B (Bristol-Myers Squibb, Woerden, the Netherlands).

    Expressing:

    Article Title: Development of an in vivo model to study clonal lineage relationships in hematopoietic cells using Brainbow2.1/Confetti mice
    Article Snippet: .. The four Brainbow2.1 XFPs were cloned from CMV-Brainbow-2.1 R (CMV-Brainbow-2.1 R was a gift from Joshua Sanes (Addgene plasmid # 18723; http://n2t.net/addgene:18723 ; RRID:Addgene_18723) [ ] into CMV-Neomycine expressing plasmids. .. Female Rag1 -/- mice were kept under specific-pathogen free conditions and treated 1 week before transplantation with triple antibiotic autoclaved acidified drinking water (560 μg/l polymyxin B (Bupha, Uitgeest Netherlands), 700 μg/l ciprofloxacin (Bayer, Mijdrecht, the Netherlands) and 800 μg/l amphotheracin B (Bristol-Myers Squibb, Woerden, the Netherlands).



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